Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Gm15003-201ENSMUST00000118884 446 ntBASIC11.1□□□□□ -0.63
Cacna1aP97445 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Gm23675-201ENSMUST00000157311 125 ntBASIC11.1□□□□□ -0.63
Cacna1aP97445 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Gm28686-201ENSMUST00000187404 609 ntBASIC11.1□□□□□ -0.63
Cacna1aP97445 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.1□□□□□ -0.63
Cacna1aP97445 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.1□□□□□ -0.63
Cacna1aP97445 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cacna1aP97445 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cacna1aP97445 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Cacna1aP97445 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cacna1aP97445 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cacna1aP97445 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cacna1aP97445 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Gm12419-201ENSMUST00000116649 636 ntBASIC11.09□□□□□ -0.63
Cacna1aP97445 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.09□□□□□ -0.63
Cacna1aP97445 Gm3150-201ENSMUST00000166418 204 ntBASIC11.09□□□□□ -0.63
Cacna1aP97445 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cacna1aP97445 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cacna1aP97445 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cacna1aP97445 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cacna1aP97445 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cacna1aP97445 Gm22594-201ENSMUST00000104251 130 ntBASIC11.09□□□□□ -0.63
Cacna1aP97445 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Gm13019-201ENSMUST00000120000 276 ntBASIC11.09□□□□□ -0.63
Cacna1aP97445 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.09□□□□□ -0.63
Cacna1aP97445 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC11.09□□□□□ -0.63
Cacna1aP97445 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.09□□□□□ -0.63
Cacna1aP97445 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.09□□□□□ -0.63
Cacna1aP97445 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cacna1aP97445 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cacna1aP97445 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cacna1aP97445 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.08□□□□□ -0.63
Cacna1aP97445 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.08□□□□□ -0.64
Cacna1aP97445 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cacna1aP97445 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cacna1aP97445 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cacna1aP97445 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cacna1aP97445 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cacna1aP97445 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cacna1aP97445 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cacna1aP97445 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Cacna1aP97445 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.08□□□□□ -0.64
Cacna1aP97445 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cacna1aP97445 Gm13916-201ENSMUST00000117368 628 ntBASIC11.08□□□□□ -0.64
Cacna1aP97445 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC11.08□□□□□ -0.64
Cacna1aP97445 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cacna1aP97445 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.08□□□□□ -0.64
Cacna1aP97445 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.08□□□□□ -0.64
Cacna1aP97445 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms