Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.06□□□□□ -0.8
SgcaP82350 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.05□□□□□ -0.8
SgcaP82350 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.05□□□□□ -0.8
SgcaP82350 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcaP82350 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.05□□□□□ -0.8
SgcaP82350 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.05□□□□□ -0.8
SgcaP82350 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.05□□□□□ -0.8
SgcaP82350 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcaP82350 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SgcaP82350 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.05□□□□□ -0.8
SgcaP82350 Mir7654-201ENSMUST00000185082 70 ntBASIC10.05□□□□□ -0.8
SgcaP82350 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcaP82350 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
SgcaP82350 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.05□□□□□ -0.8
SgcaP82350 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcaP82350 Gm6218-201ENSMUST00000219812 628 ntBASIC10.05□□□□□ -0.8
SgcaP82350 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcaP82350 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcaP82350 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcaP82350 Gm24136-201ENSMUST00000083374 165 ntBASIC10.05□□□□□ -0.8
SgcaP82350 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SgcaP82350 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
SgcaP82350 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SgcaP82350 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SgcaP82350 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcaP82350 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SgcaP82350 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcaP82350 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SgcaP82350 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcaP82350 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SgcaP82350 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SgcaP82350 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.04□□□□□ -0.8
SgcaP82350 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.04□□□□□ -0.8
SgcaP82350 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.04□□□□□ -0.8
SgcaP82350 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SgcaP82350 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SgcaP82350 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SgcaP82350 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.04□□□□□ -0.8
SgcaP82350 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.04□□□□□ -0.8
SgcaP82350 Gm37042-201ENSMUST00000193816 581 ntBASIC10.04□□□□□ -0.8
SgcaP82350 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.04□□□□□ -0.8
SgcaP82350 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SgcaP82350 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.04□□□□□ -0.8
SgcaP82350 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.04□□□□□ -0.8
SgcaP82350 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.04□□□□□ -0.8
SgcaP82350 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SgcaP82350 Lrtm1-203ENSMUST00000224760 3060 ntBASIC10.04□□□□□ -0.8
SgcaP82350 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
SgcaP82350 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.04□□□□□ -0.8
SgcaP82350 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms