Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcdP82347 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcdP82347 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SgcdP82347 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SgcdP82347 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.18□□□□□ -0.62
SgcdP82347 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcdP82347 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.17□□□□□ -0.62
SgcdP82347 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
SgcdP82347 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcdP82347 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SgcdP82347 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcdP82347 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Gm13350-201ENSMUST00000120519 479 ntBASIC11.17□□□□□ -0.62
SgcdP82347 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Gm6152-201ENSMUST00000151704 340 ntBASIC11.17□□□□□ -0.62
SgcdP82347 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.17□□□□□ -0.62
SgcdP82347 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcdP82347 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.17□□□□□ -0.62
SgcdP82347 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.17□□□□□ -0.62
SgcdP82347 Gm42599-201ENSMUST00000201308 469 ntBASIC11.17□□□□□ -0.62
SgcdP82347 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.17□□□□□ -0.62
SgcdP82347 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SgcdP82347 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Itm2b-204ENSMUST00000228637 783 ntBASIC11.17□□□□□ -0.62
SgcdP82347 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
SgcdP82347 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcdP82347 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SgcdP82347 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcdP82347 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.17□□□□□ -0.62
SgcdP82347 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.17□□□□□ -0.62
SgcdP82347 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.17□□□□□ -0.62
SgcdP82347 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcdP82347 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.16□□□□□ -0.62
SgcdP82347 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.16□□□□□ -0.62
SgcdP82347 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
SgcdP82347 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.16□□□□□ -0.62
SgcdP82347 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
SgcdP82347 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.16□□□□□ -0.62
SgcdP82347 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Gm1335-201ENSMUST00000121653 386 ntBASIC11.16□□□□□ -0.62
SgcdP82347 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.16□□□□□ -0.62
SgcdP82347 Gm16570-201ENSMUST00000161951 436 ntBASIC11.16□□□□□ -0.62
SgcdP82347 Gm27331-201ENSMUST00000183705 60 ntBASIC11.16□□□□□ -0.62
SgcdP82347 Gm38241-201ENSMUST00000192641 898 ntBASIC11.16□□□□□ -0.62
SgcdP82347 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.16□□□□□ -0.62
SgcdP82347 Gm18056-201ENSMUST00000207670 568 ntBASIC11.16□□□□□ -0.62
SgcdP82347 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Gm18061-201ENSMUST00000208350 562 ntBASIC11.16□□□□□ -0.62
SgcdP82347 Gm18063-201ENSMUST00000208529 568 ntBASIC11.16□□□□□ -0.62
SgcdP82347 Gm18052-201ENSMUST00000208750 559 ntBASIC11.16□□□□□ -0.62
SgcdP82347 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.16□□□□□ -0.62
SgcdP82347 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.16□□□□□ -0.62
SgcdP82347 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Gm16372-201ENSMUST00000073088 450 ntBASIC11.16□□□□□ -0.62
SgcdP82347 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
SgcdP82347 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcdP82347 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SgcdP82347 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.16□□□□□ -0.62
SgcdP82347 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms