Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.82□□□□□ -0.52
Shox2P70390 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Shox2P70390 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.82□□□□□ -0.52
Shox2P70390 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Shox2P70390 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.82□□□□□ -0.52
Shox2P70390 Gm14822-201ENSMUST00000122247 291 ntBASIC11.82□□□□□ -0.52
Shox2P70390 Gm12363-201ENSMUST00000122250 668 ntBASIC11.82□□□□□ -0.52
Shox2P70390 Gm10156-201ENSMUST00000122364 462 ntBASIC11.82□□□□□ -0.52
Shox2P70390 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.82□□□□□ -0.52
Shox2P70390 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.82□□□□□ -0.52
Shox2P70390 Gm24513-201ENSMUST00000174964 138 ntBASIC11.82□□□□□ -0.52
Shox2P70390 Proscos-202ENSMUST00000178990 666 ntBASIC11.82□□□□□ -0.52
Shox2P70390 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Shox2P70390 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Gm38314-201ENSMUST00000195709 625 ntBASIC11.82□□□□□ -0.52
Shox2P70390 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.82□□□□□ -0.52
Shox2P70390 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.82□□□□□ -0.52
Shox2P70390 Gm4768-201ENSMUST00000206199 686 ntBASIC11.82□□□□□ -0.52
Shox2P70390 Gm17931-201ENSMUST00000208132 634 ntBASIC11.82□□□□□ -0.52
Shox2P70390 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.82□□□□□ -0.52
Shox2P70390 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.82□□□□□ -0.52
Shox2P70390 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.82□□□□□ -0.52
Shox2P70390 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Shox2P70390 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shox2P70390 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Shox2P70390 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.81□□□□□ -0.52
Shox2P70390 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Shox2P70390 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Shox2P70390 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Shox2P70390 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Shox2P70390 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Shox2P70390 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Shox2P70390 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Shox2P70390 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Shox2P70390 Gm8213-201ENSMUST00000118191 441 ntBASIC11.81□□□□□ -0.52
Shox2P70390 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.81□□□□□ -0.52
Shox2P70390 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.81□□□□□ -0.52
Shox2P70390 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.81□□□□□ -0.52
Shox2P70390 Gm2495-201ENSMUST00000191160 466 ntBASIC11.81□□□□□ -0.52
Shox2P70390 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Shox2P70390 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Shox2P70390 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Shox2P70390 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Shox2P70390 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shox2P70390 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.81□□□□□ -0.52
Shox2P70390 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.8□□□□□ -0.52
Shox2P70390 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Shox2P70390 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Shox2P70390 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shox2P70390 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms