Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.24□□□□□ -0.29
Hmgb1P63158 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.24□□□□□ -0.29
Hmgb1P63158 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.24□□□□□ -0.29
Hmgb1P63158 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Hmgb1P63158 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.24□□□□□ -0.29
Hmgb1P63158 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.24□□□□□ -0.29
Hmgb1P63158 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.24□□□□□ -0.29
Hmgb1P63158 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Hmgb1P63158 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Hmgb1P63158 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Hmgb1P63158 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hmgb1P63158 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.24□□□□□ -0.29
Hmgb1P63158 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hmgb1P63158 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Hmgb1P63158 Lrtm1-203ENSMUST00000224760 3060 ntBASIC13.24□□□□□ -0.29
Hmgb1P63158 Gm13437-201ENSMUST00000122434 1981 ntBASIC13.23□□□□□ -0.29
Hmgb1P63158 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Hmgb1P63158 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Gm10764-202ENSMUST00000220397 2335 ntBASIC13.23□□□□□ -0.29
Hmgb1P63158 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hmgb1P63158 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.23□□□□□ -0.29
Hmgb1P63158 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hmgb1P63158 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hmgb1P63158 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hmgb1P63158 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.23□□□□□ -0.29
Hmgb1P63158 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.23□□□□□ -0.29
Hmgb1P63158 Gm13786-201ENSMUST00000122371 333 ntBASIC13.23□□□□□ -0.29
Hmgb1P63158 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.23□□□□□ -0.29
Hmgb1P63158 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hmgb1P63158 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.23□□□□□ -0.29
Hmgb1P63158 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.23□□□□□ -0.29
Hmgb1P63158 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Gm7046-201ENSMUST00000221351 977 ntBASIC13.23□□□□□ -0.29
Hmgb1P63158 Morn2-202ENSMUST00000227729 656 ntBASIC13.23□□□□□ -0.29
Hmgb1P63158 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Hmgb1P63158 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Hmgb1P63158 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hmgb1P63158 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.22□□□□□ -0.29
Hmgb1P63158 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms