Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Gm8420-201ENSMUST00000097103 598 ntBASIC10.87□□□□□ -0.67
Lsm3P62311 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.87□□□□□ -0.67
Lsm3P62311 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.87□□□□□ -0.67
Lsm3P62311 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.87□□□□□ -0.67
Lsm3P62311 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.87□□□□□ -0.67
Lsm3P62311 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.87□□□□□ -0.67
Lsm3P62311 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Lsm3P62311 Erich3-203ENSMUST00000189969 3460 ntBASIC10.87□□□□□ -0.67
Lsm3P62311 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.87□□□□□ -0.67
Lsm3P62311 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.87□□□□□ -0.67
Lsm3P62311 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm3P62311 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.87□□□□□ -0.67
Lsm3P62311 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Lsm3P62311 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Lsm3P62311 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Lsm3P62311 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Lsm3P62311 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.86□□□□□ -0.67
Lsm3P62311 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Lsm3P62311 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Lsm3P62311 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Lsm3P62311 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Gm17208-201ENSMUST00000168388 535 ntBASIC10.86□□□□□ -0.67
Lsm3P62311 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Lsm3P62311 Gm9136-201ENSMUST00000193368 454 ntBASIC10.86□□□□□ -0.67
Lsm3P62311 Gm44397-201ENSMUST00000195950 113 ntBASIC10.86□□□□□ -0.67
Lsm3P62311 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.86□□□□□ -0.67
Lsm3P62311 Gm6983-201ENSMUST00000214912 628 ntBASIC10.86□□□□□ -0.67
Lsm3P62311 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.86□□□□□ -0.67
Lsm3P62311 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Lsm3P62311 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Lsm3P62311 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.86□□□□□ -0.67
Lsm3P62311 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Lsm3P62311 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.86□□□□□ -0.67
Lsm3P62311 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Lsm3P62311 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Lsm3P62311 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm3P62311 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Lsm3P62311 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.85□□□□□ -0.67
Lsm3P62311 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Lsm3P62311 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.85□□□□□ -0.67
Lsm3P62311 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.85□□□□□ -0.67
Lsm3P62311 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.85□□□□□ -0.67
Lsm3P62311 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Lsm3P62311 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.85□□□□□ -0.67
Lsm3P62311 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.85□□□□□ -0.67
Lsm3P62311 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.85□□□□□ -0.67
Lsm3P62311 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Lsm3P62311 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms