Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC10.66□□□□□ -0.7
Sf3b6P59708 Gm45930-201ENSMUST00000221330 292 ntBASIC10.66□□□□□ -0.7
Sf3b6P59708 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.66□□□□□ -0.7
Sf3b6P59708 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.66□□□□□ -0.7
Sf3b6P59708 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sf3b6P59708 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Sf3b6P59708 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.66□□□□□ -0.7
Sf3b6P59708 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.66□□□□□ -0.7
Sf3b6P59708 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.66□□□□□ -0.7
Sf3b6P59708 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.66□□□□□ -0.7
Sf3b6P59708 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sf3b6P59708 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Sf3b6P59708 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sf3b6P59708 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Sf3b6P59708 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.65□□□□□ -0.7
Sf3b6P59708 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.65□□□□□ -0.7
Sf3b6P59708 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Gm13226-201ENSMUST00000117838 404 ntBASIC10.65□□□□□ -0.7
Sf3b6P59708 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.65□□□□□ -0.7
Sf3b6P59708 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.65□□□□□ -0.7
Sf3b6P59708 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.65□□□□□ -0.7
Sf3b6P59708 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Sf3b6P59708 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.65□□□□□ -0.7
Sf3b6P59708 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sf3b6P59708 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.65□□□□□ -0.71
Sf3b6P59708 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.65□□□□□ -0.71
Sf3b6P59708 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.65□□□□□ -0.71
Sf3b6P59708 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sf3b6P59708 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sf3b6P59708 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sf3b6P59708 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.65□□□□□ -0.71
Sf3b6P59708 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sf3b6P59708 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sf3b6P59708 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sf3b6P59708 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.65□□□□□ -0.71
Sf3b6P59708 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sf3b6P59708 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sf3b6P59708 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sf3b6P59708 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sf3b6P59708 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sf3b6P59708 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sf3b6P59708 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sf3b6P59708 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sf3b6P59708 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sf3b6P59708 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sf3b6P59708 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Sf3b6P59708 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms