Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nup43P59235 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.33□□□□□ -0.6
Nup43P59235 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nup43P59235 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.33□□□□□ -0.6
Nup43P59235 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.33□□□□□ -0.6
Nup43P59235 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.33□□□□□ -0.6
Nup43P59235 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.33□□□□□ -0.6
Nup43P59235 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.33□□□□□ -0.6
Nup43P59235 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.33□□□□□ -0.6
Nup43P59235 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.33□□□□□ -0.6
Nup43P59235 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.33□□□□□ -0.6
Nup43P59235 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.33□□□□□ -0.6
Nup43P59235 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Nup43P59235 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.33□□□□□ -0.6
Nup43P59235 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nup43P59235 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.32□□□□□ -0.6
Nup43P59235 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nup43P59235 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.32□□□□□ -0.6
Nup43P59235 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nup43P59235 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.32□□□□□ -0.6
Nup43P59235 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.32□□□□□ -0.6
Nup43P59235 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.32□□□□□ -0.6
Nup43P59235 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.32□□□□□ -0.6
Nup43P59235 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.32□□□□□ -0.6
Nup43P59235 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.32□□□□□ -0.6
Nup43P59235 Gm24749-201ENSMUST00000157838 343 ntBASIC11.32□□□□□ -0.6
Nup43P59235 Gm2383-201ENSMUST00000181461 807 ntBASIC11.32□□□□□ -0.6
Nup43P59235 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.32□□□□□ -0.6
Nup43P59235 Gm45186-201ENSMUST00000206874 478 ntBASIC11.32□□□□□ -0.6
Nup43P59235 Gm17827-201ENSMUST00000211825 742 ntBASIC11.32□□□□□ -0.6
Nup43P59235 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.32□□□□□ -0.6
Nup43P59235 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.32□□□□□ -0.6
Nup43P59235 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Nup43P59235 Mir433-201ENSMUST00000093564 124 ntBASIC11.32□□□□□ -0.6
Nup43P59235 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.32□□□□□ -0.6
Nup43P59235 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.32□□□□□ -0.6
Nup43P59235 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nup43P59235 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
Nup43P59235 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup43P59235 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nup43P59235 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.31□□□□□ -0.6
Nup43P59235 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.31□□□□□ -0.6
Nup43P59235 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Nup43P59235 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.31□□□□□ -0.6
Nup43P59235 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.31□□□□□ -0.6
Nup43P59235 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.31□□□□□ -0.6
Nup43P59235 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Nup43P59235 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Gm26286-201ENSMUST00000104166 134 ntBASIC11.31□□□□□ -0.6
Nup43P59235 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.31□□□□□ -0.6
Nup43P59235 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.31□□□□□ -0.6
Nup43P59235 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.31□□□□□ -0.6
Nup43P59235 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.31□□□□□ -0.6
Nup43P59235 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.31□□□□□ -0.6
Nup43P59235 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Nup43P59235 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nup43P59235 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.31□□□□□ -0.6
Nup43P59235 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.31□□□□□ -0.6
Nup43P59235 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.31□□□□□ -0.6
Nup43P59235 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.31□□□□□ -0.6
Nup43P59235 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.31□□□□□ -0.6
Nup43P59235 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms