Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.68□□□□□ -0.86
Sssca1P56873 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
Sssca1P56873 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Gm1335-201ENSMUST00000121653 386 ntBASIC9.68□□□□□ -0.86
Sssca1P56873 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.68□□□□□ -0.86
Sssca1P56873 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.68□□□□□ -0.86
Sssca1P56873 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Gm39404-201ENSMUST00000216350 313 ntBASIC9.68□□□□□ -0.86
Sssca1P56873 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.68□□□□□ -0.86
Sssca1P56873 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Sssca1P56873 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.68□□□□□ -0.86
Sssca1P56873 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Sssca1P56873 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sssca1P56873 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sssca1P56873 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Sssca1P56873 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sssca1P56873 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Sssca1P56873 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.67□□□□□ -0.86
Sssca1P56873 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Sssca1P56873 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.67□□□□□ -0.86
Sssca1P56873 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Sssca1P56873 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sssca1P56873 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Gm24934-201ENSMUST00000103764 111 ntBASIC9.67□□□□□ -0.86
Sssca1P56873 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sssca1P56873 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sssca1P56873 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.67□□□□□ -0.86
Sssca1P56873 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Gm27682-201ENSMUST00000183930 110 ntBASIC9.67□□□□□ -0.86
Sssca1P56873 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.67□□□□□ -0.86
Sssca1P56873 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sssca1P56873 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sssca1P56873 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.67□□□□□ -0.86
Sssca1P56873 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.67□□□□□ -0.86
Sssca1P56873 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sssca1P56873 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.67□□□□□ -0.86
Sssca1P56873 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sssca1P56873 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms