Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.96□□□□□ -0.33
Nub1P54729 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.96□□□□□ -0.33
Nub1P54729 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.96□□□□□ -0.33
Nub1P54729 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.96□□□□□ -0.33
Nub1P54729 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.96□□□□□ -0.33
Nub1P54729 Gm32999-201ENSMUST00000192693 562 ntBASIC12.96□□□□□ -0.33
Nub1P54729 Gm42599-201ENSMUST00000201308 469 ntBASIC12.96□□□□□ -0.33
Nub1P54729 Gm44651-201ENSMUST00000207343 372 ntBASIC12.96□□□□□ -0.33
Nub1P54729 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.96□□□□□ -0.33
Nub1P54729 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.96□□□□□ -0.33
Nub1P54729 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nub1P54729 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nub1P54729 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nub1P54729 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nub1P54729 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nub1P54729 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nub1P54729 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.96□□□□□ -0.34
Nub1P54729 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nub1P54729 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nub1P54729 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nub1P54729 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nub1P54729 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nub1P54729 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Nub1P54729 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Nub1P54729 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Nub1P54729 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.95□□□□□ -0.34
Nub1P54729 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nub1P54729 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Nub1P54729 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.95□□□□□ -0.34
Nub1P54729 Gm38241-201ENSMUST00000192641 898 ntBASIC12.95□□□□□ -0.34
Nub1P54729 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nub1P54729 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.95□□□□□ -0.34
Nub1P54729 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nub1P54729 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nub1P54729 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.95□□□□□ -0.34
Nub1P54729 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nub1P54729 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nub1P54729 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.95□□□□□ -0.34
Nub1P54729 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nub1P54729 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nub1P54729 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.95□□□□□ -0.34
Nub1P54729 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.94□□□□□ -0.34
Nub1P54729 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nub1P54729 Gm13665-201ENSMUST00000120830 528 ntBASIC12.94□□□□□ -0.34
Nub1P54729 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nub1P54729 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.94□□□□□ -0.34
Nub1P54729 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.94□□□□□ -0.34
Nub1P54729 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.94□□□□□ -0.34
Nub1P54729 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.94□□□□□ -0.34
Nub1P54729 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.94□□□□□ -0.34
Nub1P54729 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.94□□□□□ -0.34
Nub1P54729 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.94□□□□□ -0.34
Nub1P54729 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms