Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Atxn1P54254 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.96□□□□□ -0.5
Atxn1P54254 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Atxn1P54254 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Atxn1P54254 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.95□□□□□ -0.5
Atxn1P54254 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Atxn1P54254 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.95□□□□□ -0.5
Atxn1P54254 Gm7541-201ENSMUST00000118361 535 ntBASIC11.95□□□□□ -0.5
Atxn1P54254 Gm8199-201ENSMUST00000121323 823 ntBASIC11.95□□□□□ -0.5
Atxn1P54254 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.95□□□□□ -0.5
Atxn1P54254 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Atxn1P54254 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.95□□□□□ -0.5
Atxn1P54254 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Gm3332-201ENSMUST00000189337 928 ntBASIC11.95□□□□□ -0.5
Atxn1P54254 Gm44329-201ENSMUST00000197469 112 ntBASIC11.95□□□□□ -0.5
Atxn1P54254 Gm43610-201ENSMUST00000199117 365 ntBASIC11.95□□□□□ -0.5
Atxn1P54254 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.95□□□□□ -0.5
Atxn1P54254 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.95□□□□□ -0.5
Atxn1P54254 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Gm26448-201ENSMUST00000082446 203 ntBASIC11.95□□□□□ -0.5
Atxn1P54254 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.95□□□□□ -0.5
Atxn1P54254 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.95□□□□□ -0.5
Atxn1P54254 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Atxn1P54254 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.95□□□□□ -0.5
Atxn1P54254 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Atxn1P54254 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atxn1P54254 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.94□□□□□ -0.5
Atxn1P54254 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.94□□□□□ -0.5
Atxn1P54254 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Atxn1P54254 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.94□□□□□ -0.5
Atxn1P54254 Gm12314-201ENSMUST00000118104 538 ntBASIC11.94□□□□□ -0.5
Atxn1P54254 Gm13937-201ENSMUST00000121000 988 ntBASIC11.94□□□□□ -0.5
Atxn1P54254 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.94□□□□□ -0.5
Atxn1P54254 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Gm6485-201ENSMUST00000160676 439 ntBASIC11.94□□□□□ -0.5
Atxn1P54254 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.94□□□□□ -0.5
Atxn1P54254 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Gm8100-201ENSMUST00000182906 988 ntBASIC11.94□□□□□ -0.5
Atxn1P54254 Gm27530-201ENSMUST00000184096 98 ntBASIC11.94□□□□□ -0.5
Atxn1P54254 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.94□□□□□ -0.5
Atxn1P54254 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Gm37299-201ENSMUST00000193951 826 ntBASIC11.94□□□□□ -0.5
Atxn1P54254 Gm42937-201ENSMUST00000197360 752 ntBASIC11.94□□□□□ -0.5
Atxn1P54254 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.94□□□□□ -0.5
Atxn1P54254 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.94□□□□□ -0.5
Atxn1P54254 Gm10288-201ENSMUST00000084614 537 ntBASIC11.94□□□□□ -0.5
Atxn1P54254 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
Atxn1P54254 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.94□□□□□ -0.5
Atxn1P54254 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Atxn1P54254 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Atxn1P54254 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.94□□□□□ -0.5
Atxn1P54254 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.94□□□□□ -0.5
Atxn1P54254 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Atxn1P54254 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Atxn1P54254 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.94□□□□□ -0.5
Atxn1P54254 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atxn1P54254 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.94□□□□□ -0.5
Atxn1P54254 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms