Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Gm42693-201ENSMUST00000196779 631 ntBASIC12□□□□□ -0.49
Fdft1P53798 AC113031.8-201ENSMUST00000227856 631 ntBASIC12□□□□□ -0.49
Fdft1P53798 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Gm4864-201ENSMUST00000219894 1461 ntBASIC12□□□□□ -0.49
Fdft1P53798 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Fdft1P53798 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Fdft1P53798 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12□□□□□ -0.49
Fdft1P53798 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fdft1P53798 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Fdft1P53798 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.99□□□□□ -0.49
Fdft1P53798 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.99□□□□□ -0.49
Fdft1P53798 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Fdft1P53798 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.99□□□□□ -0.49
Fdft1P53798 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Fdft1P53798 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Fdft1P53798 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.99□□□□□ -0.49
Fdft1P53798 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.99□□□□□ -0.49
Fdft1P53798 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Gm24845-201ENSMUST00000158034 109 ntBASIC11.99□□□□□ -0.49
Fdft1P53798 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.99□□□□□ -0.49
Fdft1P53798 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Gm7399-201ENSMUST00000032395 858 ntBASIC11.99□□□□□ -0.49
Fdft1P53798 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.99□□□□□ -0.49
Fdft1P53798 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.99□□□□□ -0.49
Fdft1P53798 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.99□□□□□ -0.49
Fdft1P53798 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fdft1P53798 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Fdft1P53798 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Fdft1P53798 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Fdft1P53798 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.98□□□□□ -0.49
Fdft1P53798 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Fdft1P53798 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Gm23912-201ENSMUST00000104687 87 ntBASIC11.98□□□□□ -0.49
Fdft1P53798 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.98□□□□□ -0.49
Fdft1P53798 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Fdft1P53798 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Fdft1P53798 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.98□□□□□ -0.49
Fdft1P53798 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.98□□□□□ -0.49
Fdft1P53798 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.98□□□□□ -0.49
Fdft1P53798 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.98□□□□□ -0.49
Fdft1P53798 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms