Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Pdx1P52946 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pdx1P52946 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.85□□□□□ -0.51
Pdx1P52946 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.85□□□□□ -0.51
Pdx1P52946 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.85□□□□□ -0.51
Pdx1P52946 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.84□□□□□ -0.51
Pdx1P52946 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.84□□□□□ -0.51
Pdx1P52946 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pdx1P52946 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pdx1P52946 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Pdx1P52946 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.84□□□□□ -0.51
Pdx1P52946 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Gm11511-201ENSMUST00000118146 540 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Gm14208-201ENSMUST00000119645 678 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Pdx1P52946 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Pdx1P52946 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pdx1P52946 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Gm29615-201ENSMUST00000185371 697 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Gm28224-201ENSMUST00000186078 697 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Gm29001-201ENSMUST00000186177 697 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Gm28292-201ENSMUST00000186593 697 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Gm28101-201ENSMUST00000187608 697 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Gm29076-201ENSMUST00000187689 697 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Gm28302-201ENSMUST00000187931 697 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Gm28646-201ENSMUST00000188220 697 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Gm28205-201ENSMUST00000189177 697 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Gm29032-201ENSMUST00000189797 697 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Gm28695-201ENSMUST00000190300 697 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.84□□□□□ -0.51
Pdx1P52946 Gm37448-201ENSMUST00000192795 697 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 AY036118-201ENSMUST00000200021 923 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Pdx1P52946 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pdx1P52946 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.84□□□□□ -0.51
Pdx1P52946 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.84□□□□□ -0.51
Pdx1P52946 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pdx1P52946 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Pdx1P52946 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdx1P52946 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Pdx1P52946 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.83□□□□□ -0.51
Pdx1P52946 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.83□□□□□ -0.51
Pdx1P52946 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pdx1P52946 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pdx1P52946 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.83□□□□□ -0.52
Pdx1P52946 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Pdx1P52946 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.83□□□□□ -0.52
Pdx1P52946 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Gm22133-201ENSMUST00000102082 109 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms