Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.12□□□□□ -0.47
Lhx3P50481 Gm15207-201ENSMUST00000119259 442 ntBASIC12.12□□□□□ -0.47
Lhx3P50481 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.12□□□□□ -0.47
Lhx3P50481 Gm11941-201ENSMUST00000119904 610 ntBASIC12.12□□□□□ -0.47
Lhx3P50481 B9d1os-201ENSMUST00000137010 674 ntBASIC12.12□□□□□ -0.47
Lhx3P50481 Gm23085-201ENSMUST00000157849 293 ntBASIC12.12□□□□□ -0.47
Lhx3P50481 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.12□□□□□ -0.47
Lhx3P50481 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.12□□□□□ -0.47
Lhx3P50481 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Gm45575-201ENSMUST00000210283 548 ntBASIC12.12□□□□□ -0.47
Lhx3P50481 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.12□□□□□ -0.47
Lhx3P50481 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.12□□□□□ -0.47
Lhx3P50481 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lhx3P50481 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Lhx3P50481 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Lhx3P50481 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lhx3P50481 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.12□□□□□ -0.47
Lhx3P50481 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lhx3P50481 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.12□□□□□ -0.47
Lhx3P50481 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.12□□□□□ -0.47
Lhx3P50481 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lhx3P50481 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.11□□□□□ -0.47
Lhx3P50481 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lhx3P50481 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.11□□□□□ -0.47
Lhx3P50481 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lhx3P50481 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lhx3P50481 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lhx3P50481 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Lhx3P50481 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Lhx3P50481 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Gm13461-201ENSMUST00000120980 662 ntBASIC12.11□□□□□ -0.47
Lhx3P50481 Gm12566-201ENSMUST00000121479 359 ntBASIC12.11□□□□□ -0.47
Lhx3P50481 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.11□□□□□ -0.47
Lhx3P50481 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.11□□□□□ -0.47
Lhx3P50481 Mir5132-201ENSMUST00000175166 71 ntBASIC12.11□□□□□ -0.47
Lhx3P50481 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.11□□□□□ -0.47
Lhx3P50481 Gm6450-201ENSMUST00000200896 574 ntBASIC12.11□□□□□ -0.47
Lhx3P50481 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.11□□□□□ -0.47
Lhx3P50481 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lhx3P50481 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.11□□□□□ -0.47
Lhx3P50481 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lhx3P50481 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.11□□□□□ -0.47
Lhx3P50481 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lhx3P50481 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Lhx3P50481 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Lhx3P50481 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.11□□□□□ -0.47
Lhx3P50481 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx3P50481 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lhx3P50481 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms