Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Shmt1P50431 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
Shmt1P50431 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Shmt1P50431 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.67□□□□□ -0.38
Shmt1P50431 Gm12196-201ENSMUST00000120954 262 ntBASIC12.67□□□□□ -0.38
Shmt1P50431 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.67□□□□□ -0.38
Shmt1P50431 Gm22334-201ENSMUST00000158070 133 ntBASIC12.67□□□□□ -0.38
Shmt1P50431 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.67□□□□□ -0.38
Shmt1P50431 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.67□□□□□ -0.38
Shmt1P50431 Gm44100-201ENSMUST00000204329 436 ntBASIC12.67□□□□□ -0.38
Shmt1P50431 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Shmt1P50431 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.67□□□□□ -0.38
Shmt1P50431 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Shmt1P50431 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.67□□□□□ -0.38
Shmt1P50431 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Shmt1P50431 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shmt1P50431 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.66□□□□□ -0.38
Shmt1P50431 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Gm12857-201ENSMUST00000117678 592 ntBASIC12.66□□□□□ -0.38
Shmt1P50431 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.66□□□□□ -0.38
Shmt1P50431 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Shmt1P50431 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Gm5733-201ENSMUST00000190232 939 ntBASIC12.66□□□□□ -0.38
Shmt1P50431 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.66□□□□□ -0.38
Shmt1P50431 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Shmt1P50431 Gm21811-201ENSMUST00000096485 930 ntBASIC12.66□□□□□ -0.38
Shmt1P50431 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Shmt1P50431 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Shmt1P50431 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.66□□□□□ -0.38
Shmt1P50431 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shmt1P50431 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.65□□□□□ -0.38
Shmt1P50431 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Shmt1P50431 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Shmt1P50431 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Shmt1P50431 Gm13035-201ENSMUST00000117496 342 ntBASIC12.65□□□□□ -0.38
Shmt1P50431 Gm12036-201ENSMUST00000120008 530 ntBASIC12.65□□□□□ -0.38
Shmt1P50431 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.65□□□□□ -0.38
Shmt1P50431 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.65□□□□□ -0.38
Shmt1P50431 Gm23699-201ENSMUST00000158835 135 ntBASIC12.65□□□□□ -0.38
Shmt1P50431 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.65□□□□□ -0.38
Shmt1P50431 Gm4310-201ENSMUST00000177847 889 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms