Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
LtbrP50284 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LtbrP50284 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC14.22□□□□□ -0.13
LtbrP50284 Gm18944-201ENSMUST00000207672 643 ntBASIC14.22□□□□□ -0.13
LtbrP50284 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC14.22□□□□□ -0.13
LtbrP50284 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.22□□□□□ -0.13
LtbrP50284 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LtbrP50284 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LtbrP50284 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LtbrP50284 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Gm15595-201ENSMUST00000120840 961 ntBASIC14.21□□□□□ -0.13
LtbrP50284 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.21□□□□□ -0.13
LtbrP50284 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LtbrP50284 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Mir8115-201ENSMUST00000184992 119 ntBASIC14.21□□□□□ -0.13
LtbrP50284 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Gm35713-201ENSMUST00000210516 199 ntBASIC14.21□□□□□ -0.13
LtbrP50284 CT009711.2-202ENSMUST00000224538 973 ntBASIC14.21□□□□□ -0.13
LtbrP50284 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LtbrP50284 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LtbrP50284 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.21□□□□□ -0.13
LtbrP50284 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LtbrP50284 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
LtbrP50284 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LtbrP50284 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LtbrP50284 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LtbrP50284 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.21□□□□□ -0.14
LtbrP50284 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LtbrP50284 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LtbrP50284 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
LtbrP50284 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.2□□□□□ -0.14
LtbrP50284 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC14.2□□□□□ -0.14
LtbrP50284 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.2□□□□□ -0.14
LtbrP50284 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LtbrP50284 Gm11509-201ENSMUST00000117358 325 ntBASIC14.2□□□□□ -0.14
LtbrP50284 Gm11949-201ENSMUST00000117640 372 ntBASIC14.2□□□□□ -0.14
LtbrP50284 Gm9440-201ENSMUST00000119667 539 ntBASIC14.2□□□□□ -0.14
LtbrP50284 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.2□□□□□ -0.14
LtbrP50284 Gm12990-201ENSMUST00000120372 468 ntBASIC14.2□□□□□ -0.14
LtbrP50284 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Gm4862-201ENSMUST00000170405 438 ntBASIC14.2□□□□□ -0.14
LtbrP50284 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.2□□□□□ -0.14
LtbrP50284 Gm9645-201ENSMUST00000197131 792 ntBASIC14.2□□□□□ -0.14
LtbrP50284 Gm43610-201ENSMUST00000199117 365 ntBASIC14.2□□□□□ -0.14
LtbrP50284 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LtbrP50284 Gm4157-201ENSMUST00000211647 679 ntBASIC14.2□□□□□ -0.14
LtbrP50284 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LtbrP50284 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LtbrP50284 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms