Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.93□□□□□ -0.82
Nkx2-1P50220 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-1P50220 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.92□□□□□ -0.82
Nkx2-1P50220 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.92□□□□□ -0.82
Nkx2-1P50220 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC9.92□□□□□ -0.82
Nkx2-1P50220 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Gm11803-201ENSMUST00000119966 444 ntBASIC9.92□□□□□ -0.82
Nkx2-1P50220 Gm11597-201ENSMUST00000121423 964 ntBASIC9.92□□□□□ -0.82
Nkx2-1P50220 Gm12138-201ENSMUST00000122180 951 ntBASIC9.92□□□□□ -0.82
Nkx2-1P50220 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC9.92□□□□□ -0.82
Nkx2-1P50220 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Gm18304-201ENSMUST00000189162 546 ntBASIC9.92□□□□□ -0.82
Nkx2-1P50220 Gm37497-201ENSMUST00000195830 798 ntBASIC9.92□□□□□ -0.82
Nkx2-1P50220 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.92□□□□□ -0.82
Nkx2-1P50220 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nkx2-1P50220 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Nkx2-1P50220 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Gm8810-201ENSMUST00000172895 754 ntBASIC9.91□□□□□ -0.82
Nkx2-1P50220 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC9.91□□□□□ -0.82
Nkx2-1P50220 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Gm32025-201ENSMUST00000217960 307 ntBASIC9.91□□□□□ -0.82
Nkx2-1P50220 Gm19163-201ENSMUST00000223313 780 ntBASIC9.91□□□□□ -0.82
Nkx2-1P50220 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms