Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.85□□□□□ -0.67
Rfx3P48381 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rfx3P48381 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfx3P48381 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfx3P48381 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfx3P48381 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfx3P48381 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfx3P48381 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rfx3P48381 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rfx3P48381 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rfx3P48381 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Rfx3P48381 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Rfx3P48381 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rfx3P48381 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.84□□□□□ -0.67
Rfx3P48381 Gm13392-201ENSMUST00000117708 150 ntBASIC10.84□□□□□ -0.67
Rfx3P48381 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.84□□□□□ -0.67
Rfx3P48381 Gm13316-201ENSMUST00000140537 691 ntBASIC10.84□□□□□ -0.67
Rfx3P48381 Gm13570-201ENSMUST00000140763 309 ntBASIC10.84□□□□□ -0.67
Rfx3P48381 Mospd4-201ENSMUST00000180618 576 ntBASIC10.84□□□□□ -0.67
Rfx3P48381 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.84□□□□□ -0.67
Rfx3P48381 Gm45880-201ENSMUST00000213041 853 ntBASIC10.84□□□□□ -0.67
Rfx3P48381 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.84□□□□□ -0.67
Rfx3P48381 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.84□□□□□ -0.67
Rfx3P48381 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.84□□□□□ -0.67
Rfx3P48381 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rfx3P48381 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.84□□□□□ -0.67
Rfx3P48381 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.84□□□□□ -0.67
Rfx3P48381 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.84□□□□□ -0.67
Rfx3P48381 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rfx3P48381 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.84□□□□□ -0.67
Rfx3P48381 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Rfx3P48381 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rfx3P48381 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.83□□□□□ -0.68
Rfx3P48381 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Rfx3P48381 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Gm23931-201ENSMUST00000103842 109 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.83□□□□□ -0.68
Rfx3P48381 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
Rfx3P48381 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.83□□□□□ -0.68
Rfx3P48381 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Gm42693-201ENSMUST00000196779 631 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 Gm42627-201ENSMUST00000197347 224 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 Gm43133-201ENSMUST00000197472 463 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.83□□□□□ -0.68
Rfx3P48381 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Gm45331-201ENSMUST00000209868 554 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rfx3P48381 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Rfx3P48381 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Rfx3P48381 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms