Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Gm12164-201ENSMUST00000121695 551 ntBASIC11.36□□□□□ -0.59
Nkx2-6P43688 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Gm15881-201ENSMUST00000148792 942 ntBASIC11.36□□□□□ -0.59
Nkx2-6P43688 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.36□□□□□ -0.59
Nkx2-6P43688 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.36□□□□□ -0.59
Nkx2-6P43688 Gm45550-201ENSMUST00000209380 946 ntBASIC11.36□□□□□ -0.59
Nkx2-6P43688 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.36□□□□□ -0.59
Nkx2-6P43688 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.36□□□□□ -0.59
Nkx2-6P43688 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.36□□□□□ -0.59
Nkx2-6P43688 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Gm10288-201ENSMUST00000084614 537 ntBASIC11.36□□□□□ -0.59
Nkx2-6P43688 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.36□□□□□ -0.59
Nkx2-6P43688 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.36□□□□□ -0.59
Nkx2-6P43688 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.36□□□□□ -0.59
Nkx2-6P43688 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-6P43688 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.36□□□□□ -0.59
Nkx2-6P43688 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nkx2-6P43688 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.35□□□□□ -0.59
Nkx2-6P43688 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Gm13809-201ENSMUST00000117921 597 ntBASIC11.35□□□□□ -0.59
Nkx2-6P43688 Gm13461-201ENSMUST00000120980 662 ntBASIC11.35□□□□□ -0.59
Nkx2-6P43688 Gm8199-201ENSMUST00000121323 823 ntBASIC11.35□□□□□ -0.59
Nkx2-6P43688 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Gm17391-201ENSMUST00000171036 126 ntBASIC11.35□□□□□ -0.59
Nkx2-6P43688 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.35□□□□□ -0.59
Nkx2-6P43688 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-6P43688 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms