Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.62□□□□□ -0.55
TfamP40630 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Gm9996-201ENSMUST00000070359 913 ntBASIC11.62□□□□□ -0.55
TfamP40630 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.62□□□□□ -0.55
TfamP40630 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.62□□□□□ -0.55
TfamP40630 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
TfamP40630 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.62□□□□□ -0.55
TfamP40630 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TfamP40630 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.61□□□□□ -0.55
TfamP40630 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.61□□□□□ -0.55
TfamP40630 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.61□□□□□ -0.55
TfamP40630 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.61□□□□□ -0.55
TfamP40630 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TfamP40630 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TfamP40630 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TfamP40630 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.61□□□□□ -0.55
TfamP40630 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.61□□□□□ -0.55
TfamP40630 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TfamP40630 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
TfamP40630 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.61□□□□□ -0.55
TfamP40630 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.61□□□□□ -0.55
TfamP40630 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.61□□□□□ -0.55
TfamP40630 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.61□□□□□ -0.55
TfamP40630 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
TfamP40630 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
TfamP40630 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.61□□□□□ -0.55
TfamP40630 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TfamP40630 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.61□□□□□ -0.55
TfamP40630 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.61□□□□□ -0.55
TfamP40630 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TfamP40630 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TfamP40630 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TfamP40630 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.6□□□□□ -0.55
TfamP40630 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TfamP40630 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
TfamP40630 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.6□□□□□ -0.55
TfamP40630 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TfamP40630 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.6□□□□□ -0.55
TfamP40630 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.6□□□□□ -0.55
TfamP40630 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TfamP40630 Gm11531-201ENSMUST00000117614 555 ntBASIC11.6□□□□□ -0.55
TfamP40630 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.6□□□□□ -0.55
TfamP40630 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.6□□□□□ -0.55
TfamP40630 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.6□□□□□ -0.55
TfamP40630 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TfamP40630 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.6□□□□□ -0.55
TfamP40630 Gm37424-201ENSMUST00000191727 561 ntBASIC11.6□□□□□ -0.55
TfamP40630 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms