Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chd1P40201 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chd1P40201 Gm28424-201ENSMUST00000187393 1319 ntBASIC17.58■□□□□ 0.41
Chd1P40201 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chd1P40201 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chd1P40201 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Chd1P40201 Gm3283-201ENSMUST00000199319 1350 ntBASIC17.58■□□□□ 0.4
Chd1P40201 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Chd1P40201 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chd1P40201 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd1P40201 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd1P40201 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Chd1P40201 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Chd1P40201 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd1P40201 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd1P40201 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chd1P40201 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chd1P40201 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC17.58■□□□□ 0.4
Chd1P40201 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chd1P40201 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chd1P40201 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chd1P40201 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chd1P40201 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC17.58■□□□□ 0.4
Chd1P40201 Gm18256-201ENSMUST00000209087 907 ntBASIC17.58■□□□□ 0.4
Chd1P40201 AC125409.3-201ENSMUST00000223488 653 ntBASIC17.58■□□□□ 0.4
Chd1P40201 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC17.58■□□□□ 0.4
Chd1P40201 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC17.57■□□□□ 0.4
Chd1P40201 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chd1P40201 Gm9244-201ENSMUST00000056767 2129 ntBASIC17.57■□□□□ 0.4
Chd1P40201 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Chd1P40201 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chd1P40201 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Chd1P40201 Gm8659-201ENSMUST00000120024 1084 ntBASIC17.57■□□□□ 0.4
Chd1P40201 Gm6238-201ENSMUST00000120999 465 ntBASIC17.57■□□□□ 0.4
Chd1P40201 Gm24140-201ENSMUST00000122773 326 ntBASIC17.57■□□□□ 0.4
Chd1P40201 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Gm37858-201ENSMUST00000192759 1231 ntBASIC17.57■□□□□ 0.4
Chd1P40201 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC17.57■□□□□ 0.4
Chd1P40201 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC17.57■□□□□ 0.4
Chd1P40201 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 AC154435.1-201ENSMUST00000223938 959 ntBASIC17.57■□□□□ 0.4
Chd1P40201 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Chd1P40201 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chd1P40201 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC17.57■□□□□ 0.4
Chd1P40201 Gm37437-201ENSMUST00000194451 1937 ntBASIC17.57■□□□□ 0.4
Chd1P40201 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1P40201 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.56■□□□□ 0.4
Chd1P40201 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Chd1P40201 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC17.56■□□□□ 0.4
Chd1P40201 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Chd1P40201 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chd1P40201 AA623943-201ENSMUST00000121794 354 ntBASIC17.56■□□□□ 0.4
Chd1P40201 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC17.56■□□□□ 0.4
Chd1P40201 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC17.56■□□□□ 0.4
Chd1P40201 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC17.56■□□□□ 0.4
Chd1P40201 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Gm6548-201ENSMUST00000167498 1165 ntBASIC17.56■□□□□ 0.4
Chd1P40201 Gm44420-201ENSMUST00000203669 490 ntBASIC17.56■□□□□ 0.4
Chd1P40201 CT030195.2-201ENSMUST00000226074 1286 ntBASIC17.56■□□□□ 0.4
Chd1P40201 AC107711.4-201ENSMUST00000228948 440 ntBASIC17.56■□□□□ 0.4
Chd1P40201 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chd1P40201 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Chd1P40201 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Gm44758-201ENSMUST00000206096 2068 ntBASIC17.56■□□□□ 0.4
Chd1P40201 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1P40201 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Chd1P40201 Gm42748-201ENSMUST00000199354 2341 ntBASIC17.55■□□□□ 0.4
Chd1P40201 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1P40201 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC17.55■□□□□ 0.4
Chd1P40201 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1P40201 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC17.55■□□□□ 0.4
Chd1P40201 Gm5254-201ENSMUST00000188353 977 ntBASIC17.55■□□□□ 0.4
Chd1P40201 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1P40201 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms