Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Gm14132-201ENSMUST00000117188 1719 ntBASIC9.9□□□□□ -0.83
Cdkn1aP39689 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdkn1aP39689 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdkn1aP39689 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdkn1aP39689 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.9□□□□□ -0.83
Cdkn1aP39689 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdkn1aP39689 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdkn1aP39689 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.83
Cdkn1aP39689 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdkn1aP39689 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdkn1aP39689 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.89□□□□□ -0.83
Cdkn1aP39689 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.89□□□□□ -0.83
Cdkn1aP39689 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.89□□□□□ -0.83
Cdkn1aP39689 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.89□□□□□ -0.83
Cdkn1aP39689 Gm23251-201ENSMUST00000103773 110 ntBASIC9.89□□□□□ -0.83
Cdkn1aP39689 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Gm11660-201ENSMUST00000120955 412 ntBASIC9.89□□□□□ -0.83
Cdkn1aP39689 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Gm5733-201ENSMUST00000190232 939 ntBASIC9.89□□□□□ -0.83
Cdkn1aP39689 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Gm37986-201ENSMUST00000193285 383 ntBASIC9.89□□□□□ -0.83
Cdkn1aP39689 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cdkn1aP39689 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdkn1aP39689 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.88□□□□□ -0.83
Cdkn1aP39689 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm12165-201ENSMUST00000117047 342 ntBASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm7851-201ENSMUST00000117574 323 ntBASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm11663-201ENSMUST00000117888 290 ntBASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm15004-201ENSMUST00000119192 630 ntBASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm11941-201ENSMUST00000119904 610 ntBASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm15432-201ENSMUST00000121106 195 ntBASIC9.88□□□□□ -0.83
Cdkn1aP39689 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.88□□□□□ -0.83
Cdkn1aP39689 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm23085-201ENSMUST00000157849 293 ntBASIC9.88□□□□□ -0.83
Cdkn1aP39689 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdkn1aP39689 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm19353-201ENSMUST00000184561 445 ntBASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm2965-201ENSMUST00000198365 343 ntBASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.88□□□□□ -0.83
Cdkn1aP39689 Gm43947-201ENSMUST00000203019 959 ntBASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms