Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.08□□□□□ -0.64
Sftpa1P35242 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.08□□□□□ -0.64
Sftpa1P35242 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.08□□□□□ -0.64
Sftpa1P35242 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.08□□□□□ -0.64
Sftpa1P35242 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sftpa1P35242 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.08□□□□□ -0.64
Sftpa1P35242 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.08□□□□□ -0.64
Sftpa1P35242 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.08□□□□□ -0.64
Sftpa1P35242 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.08□□□□□ -0.64
Sftpa1P35242 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.08□□□□□ -0.64
Sftpa1P35242 Gm35713-201ENSMUST00000210516 199 ntBASIC11.08□□□□□ -0.64
Sftpa1P35242 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.08□□□□□ -0.64
Sftpa1P35242 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.08□□□□□ -0.64
Sftpa1P35242 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.08□□□□□ -0.64
Sftpa1P35242 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.08□□□□□ -0.64
Sftpa1P35242 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sftpa1P35242 Gm25201-201ENSMUST00000083093 170 ntBASIC11.08□□□□□ -0.64
Sftpa1P35242 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.08□□□□□ -0.64
Sftpa1P35242 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.08□□□□□ -0.64
Sftpa1P35242 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sftpa1P35242 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sftpa1P35242 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sftpa1P35242 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sftpa1P35242 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.07□□□□□ -0.64
Sftpa1P35242 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Sftpa1P35242 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.07□□□□□ -0.64
Sftpa1P35242 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.07□□□□□ -0.64
Sftpa1P35242 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.07□□□□□ -0.64
Sftpa1P35242 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sftpa1P35242 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.07□□□□□ -0.64
Sftpa1P35242 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Gm5621-201ENSMUST00000187303 640 ntBASIC11.07□□□□□ -0.64
Sftpa1P35242 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.07□□□□□ -0.64
Sftpa1P35242 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.07□□□□□ -0.64
Sftpa1P35242 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.07□□□□□ -0.64
Sftpa1P35242 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sftpa1P35242 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sftpa1P35242 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Sftpa1P35242 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.07□□□□□ -0.64
Sftpa1P35242 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sftpa1P35242 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sftpa1P35242 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Sftpa1P35242 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
Sftpa1P35242 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Sftpa1P35242 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sftpa1P35242 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms