Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.02□□□□□ -0.65
Nedd8P29595 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.02□□□□□ -0.65
Nedd8P29595 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.02□□□□□ -0.65
Nedd8P29595 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Nedd8P29595 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Nedd8P29595 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.02□□□□□ -0.65
Nedd8P29595 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Nedd8P29595 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Nedd8P29595 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.02□□□□□ -0.65
Nedd8P29595 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Nedd8P29595 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.02□□□□□ -0.65
Nedd8P29595 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.02□□□□□ -0.65
Nedd8P29595 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nedd8P29595 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nedd8P29595 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.01□□□□□ -0.65
Nedd8P29595 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.01□□□□□ -0.65
Nedd8P29595 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.01□□□□□ -0.65
Nedd8P29595 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nedd8P29595 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.01□□□□□ -0.65
Nedd8P29595 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.01□□□□□ -0.65
Nedd8P29595 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.01□□□□□ -0.65
Nedd8P29595 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.01□□□□□ -0.65
Nedd8P29595 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nedd8P29595 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.01□□□□□ -0.65
Nedd8P29595 Gm6983-201ENSMUST00000214912 628 ntBASIC11.01□□□□□ -0.65
Nedd8P29595 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nedd8P29595 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nedd8P29595 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nedd8P29595 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.01□□□□□ -0.65
Nedd8P29595 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.01□□□□□ -0.65
Nedd8P29595 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Nedd8P29595 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.01□□□□□ -0.65
Nedd8P29595 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.01□□□□□ -0.65
Nedd8P29595 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.01□□□□□ -0.65
Nedd8P29595 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
Nedd8P29595 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nedd8P29595 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nedd8P29595 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nedd8P29595 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.01□□□□□ -0.65
Nedd8P29595 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nedd8P29595 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nedd8P29595 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nedd8P29595 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nedd8P29595 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nedd8P29595 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11□□□□□ -0.65
Nedd8P29595 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nedd8P29595 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11□□□□□ -0.65
Nedd8P29595 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nedd8P29595 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nedd8P29595 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11□□□□□ -0.65
Nedd8P29595 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nedd8P29595 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Nedd8P29595 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms