Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm12036-201ENSMUST00000120008 530 ntBASIC12.81□□□□□ -0.36
Mmp3P28862 Gm14585-201ENSMUST00000120713 634 ntBASIC12.81□□□□□ -0.36
Mmp3P28862 Gm14665-201ENSMUST00000122294 557 ntBASIC12.81□□□□□ -0.36
Mmp3P28862 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Gm9192-201ENSMUST00000183221 985 ntBASIC12.81□□□□□ -0.36
Mmp3P28862 Mir8115-201ENSMUST00000184992 119 ntBASIC12.81□□□□□ -0.36
Mmp3P28862 Gm9463-201ENSMUST00000206707 601 ntBASIC12.81□□□□□ -0.36
Mmp3P28862 Gm45113-201ENSMUST00000207518 165 ntBASIC12.81□□□□□ -0.36
Mmp3P28862 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Mmp3P28862 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.81□□□□□ -0.36
Mmp3P28862 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
Mmp3P28862 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Mmp3P28862 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Mmp3P28862 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.81□□□□□ -0.36
Mmp3P28862 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Mmp3P28862 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Mmp3P28862 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Mmp3P28862 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.81□□□□□ -0.36
Mmp3P28862 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.81□□□□□ -0.36
Mmp3P28862 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp3P28862 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.8□□□□□ -0.36
Mmp3P28862 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Mmp3P28862 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Mmp3P28862 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.8□□□□□ -0.36
Mmp3P28862 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.8□□□□□ -0.36
Mmp3P28862 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Mmp3P28862 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Mmp3P28862 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.8□□□□□ -0.36
Mmp3P28862 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.8□□□□□ -0.36
Mmp3P28862 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.8□□□□□ -0.36
Mmp3P28862 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.8□□□□□ -0.36
Mmp3P28862 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Mmp3P28862 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Gm6450-201ENSMUST00000200896 574 ntBASIC12.8□□□□□ -0.36
Mmp3P28862 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.8□□□□□ -0.36
Mmp3P28862 Gm45550-201ENSMUST00000209380 946 ntBASIC12.8□□□□□ -0.36
Mmp3P28862 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.8□□□□□ -0.36
Mmp3P28862 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Mmp3P28862 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Mmp3P28862 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Mmp3P28862 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Mmp3P28862 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Mmp3P28862 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp3P28862 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Mmp3P28862 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.79□□□□□ -0.36
Mmp3P28862 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Gm11949-201ENSMUST00000117640 372 ntBASIC12.79□□□□□ -0.36
Mmp3P28862 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.79□□□□□ -0.36
Mmp3P28862 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.79□□□□□ -0.36
Mmp3P28862 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.79□□□□□ -0.36
Mmp3P28862 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Gm24844-201ENSMUST00000158679 127 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms