Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.04□□□□□ -0.48
RxrbP28704 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.04□□□□□ -0.48
RxrbP28704 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.04□□□□□ -0.48
RxrbP28704 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.04□□□□□ -0.48
RxrbP28704 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.04□□□□□ -0.48
RxrbP28704 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.04□□□□□ -0.48
RxrbP28704 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.04□□□□□ -0.48
RxrbP28704 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.04□□□□□ -0.48
RxrbP28704 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.04□□□□□ -0.48
RxrbP28704 Gm20614-201ENSMUST00000177106 632 ntBASIC12.04□□□□□ -0.48
RxrbP28704 Gm27682-201ENSMUST00000183930 110 ntBASIC12.04□□□□□ -0.48
RxrbP28704 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.04□□□□□ -0.48
RxrbP28704 Gm18584-201ENSMUST00000203098 964 ntBASIC12.04□□□□□ -0.48
RxrbP28704 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.04□□□□□ -0.48
RxrbP28704 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.04□□□□□ -0.48
RxrbP28704 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.04□□□□□ -0.48
RxrbP28704 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RxrbP28704 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.04□□□□□ -0.48
RxrbP28704 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RxrbP28704 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.04□□□□□ -0.48
RxrbP28704 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.04□□□□□ -0.48
RxrbP28704 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RxrbP28704 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RxrbP28704 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RxrbP28704 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RxrbP28704 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
RxrbP28704 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RxrbP28704 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.03□□□□□ -0.48
RxrbP28704 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.03□□□□□ -0.48
RxrbP28704 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.03□□□□□ -0.48
RxrbP28704 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.03□□□□□ -0.48
RxrbP28704 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Gm23912-201ENSMUST00000104687 87 ntBASIC12.03□□□□□ -0.48
RxrbP28704 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.03□□□□□ -0.48
RxrbP28704 Gm1335-201ENSMUST00000121653 386 ntBASIC12.03□□□□□ -0.48
RxrbP28704 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.03□□□□□ -0.48
RxrbP28704 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.03□□□□□ -0.48
RxrbP28704 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Gm807-202ENSMUST00000224929 408 ntBASIC12.03□□□□□ -0.48
RxrbP28704 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RxrbP28704 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.03□□□□□ -0.48
RxrbP28704 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
RxrbP28704 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.03□□□□□ -0.48
RxrbP28704 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RxrbP28704 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RxrbP28704 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.03□□□□□ -0.48
RxrbP28704 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RxrbP28704 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RxrbP28704 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RxrbP28704 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
RxrbP28704 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RxrbP28704 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms