Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.36□□□□□ -0.43
Nfkb1P25799 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nfkb1P25799 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.35□□□□□ -0.43
Nfkb1P25799 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.35□□□□□ -0.43
Nfkb1P25799 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.35□□□□□ -0.43
Nfkb1P25799 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Nfkb1P25799 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.35□□□□□ -0.43
Nfkb1P25799 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.35□□□□□ -0.43
Nfkb1P25799 Gm24514-201ENSMUST00000174961 285 ntBASIC12.35□□□□□ -0.43
Nfkb1P25799 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Nfkb1P25799 Gm8100-201ENSMUST00000182906 988 ntBASIC12.35□□□□□ -0.43
Nfkb1P25799 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Nfkb1P25799 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nfkb1P25799 Gm9797-202ENSMUST00000218003 294 ntBASIC12.35□□□□□ -0.43
Nfkb1P25799 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.35□□□□□ -0.43
Nfkb1P25799 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.35□□□□□ -0.43
Nfkb1P25799 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.35□□□□□ -0.43
Nfkb1P25799 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nfkb1P25799 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Nfkb1P25799 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.35□□□□□ -0.43
Nfkb1P25799 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.35□□□□□ -0.43
Nfkb1P25799 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nfkb1P25799 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nfkb1P25799 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.35□□□□□ -0.43
Nfkb1P25799 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nfkb1P25799 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nfkb1P25799 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nfkb1P25799 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Nfkb1P25799 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.34□□□□□ -0.43
Nfkb1P25799 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nfkb1P25799 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.34□□□□□ -0.43
Nfkb1P25799 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm12616-201ENSMUST00000118594 382 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm23085-201ENSMUST00000157849 293 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm12624-201ENSMUST00000177615 382 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm12621-201ENSMUST00000177760 382 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm12615-201ENSMUST00000177970 382 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm12622-201ENSMUST00000177975 382 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm12627-201ENSMUST00000178412 382 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm12625-201ENSMUST00000179122 382 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm12614-201ENSMUST00000179586 382 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm12613-201ENSMUST00000180323 382 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm18893-201ENSMUST00000198416 943 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm44124-201ENSMUST00000204159 472 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.34□□□□□ -0.43
Nfkb1P25799 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.34□□□□□ -0.43
Nfkb1P25799 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm10288-201ENSMUST00000084614 537 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nfkb1P25799 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.34□□□□□ -0.43
Nfkb1P25799 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nfkb1P25799 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms