Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 AC154849.3-201ENSMUST00000223733 1660 ntBASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Gm15236-201ENSMUST00000117309 379 ntBASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Gm5616-201ENSMUST00000165252 384 ntBASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Gm8741-201ENSMUST00000174736 384 ntBASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Gm5706-201ENSMUST00000181525 993 ntBASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Gm29199-201ENSMUST00000187766 775 ntBASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Gm17827-201ENSMUST00000211825 742 ntBASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Map1b-203ENSMUST00000223725 2669 ntBASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Gm11511-201ENSMUST00000118146 540 ntBASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Gm12997-201ENSMUST00000120207 640 ntBASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Gm5244-202ENSMUST00000189517 743 ntBASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Gm18893-201ENSMUST00000198416 943 ntBASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf1bP25119 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms