Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tnfrsf1aP25118 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Gm12036-201ENSMUST00000120008 530 ntBASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Gm43118-201ENSMUST00000199149 775 ntBASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Gm19309-201ENSMUST00000218295 205 ntBASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tnfrsf1aP25118 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Gm11531-201ENSMUST00000117614 555 ntBASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Rprl1-201ENSMUST00000158050 327 ntBASIC10.03□□□□□ -0.8
Tnfrsf1aP25118 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms