Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clk1P22518 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clk1P22518 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Clk1P22518 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Clk1P22518 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.29□□□□□ -0.6
Clk1P22518 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.29□□□□□ -0.6
Clk1P22518 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.29□□□□□ -0.6
Clk1P22518 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clk1P22518 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clk1P22518 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clk1P22518 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.29□□□□□ -0.6
Clk1P22518 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clk1P22518 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Clk1P22518 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clk1P22518 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clk1P22518 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clk1P22518 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
Clk1P22518 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Clk1P22518 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Clk1P22518 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Clk1P22518 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Clk1P22518 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.28□□□□□ -0.6
Clk1P22518 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Clk1P22518 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.28□□□□□ -0.6
Clk1P22518 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Clk1P22518 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.28□□□□□ -0.6
Clk1P22518 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.28□□□□□ -0.6
Clk1P22518 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.28□□□□□ -0.6
Clk1P22518 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.28□□□□□ -0.6
Clk1P22518 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.28□□□□□ -0.6
Clk1P22518 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.28□□□□□ -0.6
Clk1P22518 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.28□□□□□ -0.6
Clk1P22518 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.28□□□□□ -0.6
Clk1P22518 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.28□□□□□ -0.6
Clk1P22518 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Clk1P22518 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.28□□□□□ -0.6
Clk1P22518 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Clk1P22518 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Clk1P22518 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Clk1P22518 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Clk1P22518 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.27□□□□□ -0.6
Clk1P22518 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Clk1P22518 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Clk1P22518 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Clk1P22518 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.27□□□□□ -0.6
Clk1P22518 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.27□□□□□ -0.6
Clk1P22518 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Clk1P22518 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Clk1P22518 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Clk1P22518 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Clk1P22518 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Clk1P22518 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Gm45597-201ENSMUST00000211524 1994 ntBASIC11.27□□□□□ -0.61
Clk1P22518 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.27□□□□□ -0.61
Clk1P22518 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.27□□□□□ -0.61
Clk1P22518 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Gm4986-201ENSMUST00000119731 549 ntBASIC11.27□□□□□ -0.61
Clk1P22518 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Clk1P22518 Gm13570-201ENSMUST00000140763 309 ntBASIC11.27□□□□□ -0.61
Clk1P22518 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Gm37489-201ENSMUST00000191883 159 ntBASIC11.27□□□□□ -0.61
Clk1P22518 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.27□□□□□ -0.61
Clk1P22518 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.27□□□□□ -0.61
Clk1P22518 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.27□□□□□ -0.61
Clk1P22518 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.27□□□□□ -0.61
Clk1P22518 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Clk1P22518 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 379.9 ms