Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
BdnfP21237 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
BdnfP21237 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
BdnfP21237 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
BdnfP21237 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.54□□□□□ -0.56
BdnfP21237 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.54□□□□□ -0.56
BdnfP21237 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.54□□□□□ -0.56
BdnfP21237 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Gm13736-201ENSMUST00000119272 253 ntBASIC11.54□□□□□ -0.56
BdnfP21237 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.54□□□□□ -0.56
BdnfP21237 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.54□□□□□ -0.56
BdnfP21237 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.54□□□□□ -0.56
BdnfP21237 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.54□□□□□ -0.56
BdnfP21237 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.54□□□□□ -0.56
BdnfP21237 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.54□□□□□ -0.56
BdnfP21237 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
BdnfP21237 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
BdnfP21237 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
BdnfP21237 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.54□□□□□ -0.56
BdnfP21237 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 AC154352.1-201ENSMUST00000221477 2365 ntBASIC11.54□□□□□ -0.56
BdnfP21237 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BdnfP21237 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.54□□□□□ -0.56
BdnfP21237 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.54□□□□□ -0.56
BdnfP21237 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
BdnfP21237 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.53□□□□□ -0.56
BdnfP21237 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
BdnfP21237 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
BdnfP21237 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
BdnfP21237 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.53□□□□□ -0.56
BdnfP21237 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
BdnfP21237 Gm13226-201ENSMUST00000117838 404 ntBASIC11.53□□□□□ -0.56
BdnfP21237 Gm12314-201ENSMUST00000118104 538 ntBASIC11.53□□□□□ -0.56
BdnfP21237 Gm11425-201ENSMUST00000119608 498 ntBASIC11.53□□□□□ -0.56
BdnfP21237 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.53□□□□□ -0.56
BdnfP21237 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
BdnfP21237 Gm45784-201ENSMUST00000188360 142 ntBASIC11.53□□□□□ -0.56
BdnfP21237 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.53□□□□□ -0.56
BdnfP21237 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
BdnfP21237 Gm39404-201ENSMUST00000216350 313 ntBASIC11.53□□□□□ -0.56
BdnfP21237 Gm5186-201ENSMUST00000218781 920 ntBASIC11.53□□□□□ -0.56
BdnfP21237 Gm5781-201ENSMUST00000219792 443 ntBASIC11.53□□□□□ -0.56
BdnfP21237 Gm45930-201ENSMUST00000221330 292 ntBASIC11.53□□□□□ -0.56
BdnfP21237 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.53□□□□□ -0.56
BdnfP21237 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.53□□□□□ -0.56
BdnfP21237 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
BdnfP21237 Gm9396-201ENSMUST00000076703 567 ntBASIC11.53□□□□□ -0.56
BdnfP21237 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
BdnfP21237 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
BdnfP21237 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
BdnfP21237 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
BdnfP21237 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
BdnfP21237 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.53□□□□□ -0.56
BdnfP21237 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BdnfP21237 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
BdnfP21237 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
BdnfP21237 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms