Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.48□□□□□ -0.57
Hoxb9P20615 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb9P20615 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb9P20615 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.48□□□□□ -0.57
Hoxb9P20615 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb9P20615 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb9P20615 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.48□□□□□ -0.57
Hoxb9P20615 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.48□□□□□ -0.57
Hoxb9P20615 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb9P20615 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hoxb9P20615 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hoxb9P20615 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hoxb9P20615 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hoxb9P20615 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.47□□□□□ -0.57
Hoxb9P20615 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Gm6082-201ENSMUST00000215204 454 ntBASIC11.47□□□□□ -0.57
Hoxb9P20615 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.47□□□□□ -0.57
Hoxb9P20615 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hoxb9P20615 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb9P20615 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxb9P20615 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hoxb9P20615 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.46□□□□□ -0.57
Hoxb9P20615 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hoxb9P20615 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxb9P20615 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.46□□□□□ -0.57
Hoxb9P20615 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Gm13996-201ENSMUST00000118456 430 ntBASIC11.46□□□□□ -0.57
Hoxb9P20615 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.46□□□□□ -0.57
Hoxb9P20615 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.46□□□□□ -0.57
Hoxb9P20615 Gm25668-201ENSMUST00000157700 129 ntBASIC11.46□□□□□ -0.57
Hoxb9P20615 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.46□□□□□ -0.57
Hoxb9P20615 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.46□□□□□ -0.57
Hoxb9P20615 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hoxb9P20615 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.46□□□□□ -0.57
Hoxb9P20615 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxb9P20615 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb9P20615 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb9P20615 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Hoxb9P20615 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb9P20615 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.46□□□□□ -0.58
Hoxb9P20615 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb9P20615 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb9P20615 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb9P20615 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb9P20615 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Hoxb9P20615 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb9P20615 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb9P20615 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb9P20615 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb9P20615 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb9P20615 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms