Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tnfrsf9P20334 Gm28581-201ENSMUST00000186086 2177 ntBASIC10.08□□□□□ -0.8
Tnfrsf9P20334 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf9P20334 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf9P20334 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf9P20334 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tnfrsf9P20334 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.07□□□□□ -0.8
Tnfrsf9P20334 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Gm649-201ENSMUST00000117284 1054 ntBASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Gm27046-201ENSMUST00000182160 463 ntBASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Gm2546-201ENSMUST00000182630 991 ntBASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 AC116589.4-201ENSMUST00000222390 216 ntBASIC10.07□□□□□ -0.8
Tnfrsf9P20334 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tnfrsf9P20334 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Gm23200-201ENSMUST00000104379 132 ntBASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.06□□□□□ -0.8
Tnfrsf9P20334 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms