Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
PdgfaP20033 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PdgfaP20033 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
PdgfaP20033 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PdgfaP20033 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
PdgfaP20033 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PdgfaP20033 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
PdgfaP20033 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
PdgfaP20033 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
PdgfaP20033 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.02□□□□□ -0.49
PdgfaP20033 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.02□□□□□ -0.49
PdgfaP20033 Gm16479-201ENSMUST00000121706 932 ntBASIC12.02□□□□□ -0.49
PdgfaP20033 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.02□□□□□ -0.49
PdgfaP20033 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.02□□□□□ -0.49
PdgfaP20033 Gm20482-202ENSMUST00000174729 825 ntBASIC12.02□□□□□ -0.49
PdgfaP20033 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.02□□□□□ -0.49
PdgfaP20033 Mospd4-201ENSMUST00000180618 576 ntBASIC12.02□□□□□ -0.49
PdgfaP20033 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12.02□□□□□ -0.49
PdgfaP20033 Gm43377-201ENSMUST00000201640 455 ntBASIC12.02□□□□□ -0.49
PdgfaP20033 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.02□□□□□ -0.49
PdgfaP20033 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.02□□□□□ -0.49
PdgfaP20033 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.02□□□□□ -0.49
PdgfaP20033 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
PdgfaP20033 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.02□□□□□ -0.49
PdgfaP20033 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.02□□□□□ -0.49
PdgfaP20033 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.02□□□□□ -0.49
PdgfaP20033 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
PdgfaP20033 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
PdgfaP20033 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.02□□□□□ -0.49
PdgfaP20033 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdgfaP20033 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.02□□□□□ -0.49
PdgfaP20033 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
PdgfaP20033 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
PdgfaP20033 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.01□□□□□ -0.49
PdgfaP20033 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.01□□□□□ -0.49
PdgfaP20033 Gm16202-201ENSMUST00000117532 544 ntBASIC12.01□□□□□ -0.49
PdgfaP20033 Gm6447-201ENSMUST00000118905 835 ntBASIC12.01□□□□□ -0.49
PdgfaP20033 Gm12363-201ENSMUST00000122250 668 ntBASIC12.01□□□□□ -0.49
PdgfaP20033 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.01□□□□□ -0.49
PdgfaP20033 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.01□□□□□ -0.49
PdgfaP20033 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.01□□□□□ -0.49
PdgfaP20033 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.01□□□□□ -0.49
PdgfaP20033 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.01□□□□□ -0.49
PdgfaP20033 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
PdgfaP20033 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
PdgfaP20033 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
PdgfaP20033 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
PdgfaP20033 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
PdgfaP20033 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
PdgfaP20033 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.01□□□□□ -0.49
PdgfaP20033 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdgfaP20033 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12□□□□□ -0.49
PdgfaP20033 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12□□□□□ -0.49
PdgfaP20033 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PdgfaP20033 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PdgfaP20033 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PdgfaP20033 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
PdgfaP20033 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
PdgfaP20033 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12□□□□□ -0.49
PdgfaP20033 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PdgfaP20033 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms