Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd48P18181 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cd48P18181 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cd48P18181 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd48P18181 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd48P18181 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Cd48P18181 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd48P18181 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Cd48P18181 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd48P18181 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.77□□□□□ -0.69
Cd48P18181 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd48P18181 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd48P18181 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd48P18181 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Cd48P18181 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd48P18181 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd48P18181 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cd48P18181 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cd48P18181 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd48P18181 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cd48P18181 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cd48P18181 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.76□□□□□ -0.69
Cd48P18181 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Cd48P18181 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.76□□□□□ -0.69
Cd48P18181 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd48P18181 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd48P18181 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd48P18181 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd48P18181 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.76□□□□□ -0.69
Cd48P18181 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.76□□□□□ -0.69
Cd48P18181 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.76□□□□□ -0.69
Cd48P18181 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cd48P18181 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cd48P18181 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd48P18181 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd48P18181 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd48P18181 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd48P18181 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.75□□□□□ -0.69
Cd48P18181 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Cd48P18181 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd48P18181 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.75□□□□□ -0.69
Cd48P18181 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd48P18181 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd48P18181 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Cd48P18181 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd48P18181 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd48P18181 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd48P18181 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cd48P18181 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd48P18181 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd48P18181 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.75□□□□□ -0.69
Cd48P18181 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.75□□□□□ -0.69
Cd48P18181 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd48P18181 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd48P18181 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cd48P18181 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.75□□□□□ -0.69
Cd48P18181 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd48P18181 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cd48P18181 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cd48P18181 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd48P18181 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd48P18181 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.75□□□□□ -0.69
Cd48P18181 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.75□□□□□ -0.69
Cd48P18181 Snora78-201ENSMUST00000158630 128 ntBASIC10.75□□□□□ -0.69
Cd48P18181 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.75□□□□□ -0.69
Cd48P18181 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.75□□□□□ -0.69
Cd48P18181 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.75□□□□□ -0.69
Cd48P18181 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms