Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.57□□□□□ -0.72
Ccl3P10855 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Gm24398-201ENSMUST00000157870 109 ntBASIC10.57□□□□□ -0.72
Ccl3P10855 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.57□□□□□ -0.72
Ccl3P10855 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.57□□□□□ -0.72
Ccl3P10855 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.57□□□□□ -0.72
Ccl3P10855 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Ccl3P10855 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Ccl3P10855 Gm45594-201ENSMUST00000211717 241 ntBASIC10.57□□□□□ -0.72
Ccl3P10855 Gm7940-201ENSMUST00000218195 769 ntBASIC10.57□□□□□ -0.72
Ccl3P10855 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.57□□□□□ -0.72
Ccl3P10855 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.57□□□□□ -0.72
Ccl3P10855 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Ccl3P10855 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Ccl3P10855 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Ccl3P10855 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.57□□□□□ -0.72
Ccl3P10855 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccl3P10855 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccl3P10855 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ccl3P10855 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ccl3P10855 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ccl3P10855 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccl3P10855 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.56□□□□□ -0.72
Ccl3P10855 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ccl3P10855 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ccl3P10855 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ccl3P10855 Gm12419-201ENSMUST00000116649 636 ntBASIC10.56□□□□□ -0.72
Ccl3P10855 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.56□□□□□ -0.72
Ccl3P10855 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ccl3P10855 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Ccl3P10855 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Gm37981-201ENSMUST00000194280 535 ntBASIC10.56□□□□□ -0.72
Ccl3P10855 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.56□□□□□ -0.72
Ccl3P10855 Gm8342-201ENSMUST00000209839 757 ntBASIC10.56□□□□□ -0.72
Ccl3P10855 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccl3P10855 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ccl3P10855 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ccl3P10855 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Ccl3P10855 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.56□□□□□ -0.72
Ccl3P10855 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl3P10855 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.55□□□□□ -0.72
Ccl3P10855 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.55□□□□□ -0.72
Ccl3P10855 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl3P10855 Gm28937-201ENSMUST00000185413 695 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms