Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxd3P09027 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxd3P09027 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxd3P09027 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Hoxd3P09027 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Hoxd3P09027 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC9.56□□□□□ -0.88
Hoxd3P09027 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxd3P09027 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.56□□□□□ -0.88
Hoxd3P09027 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxd3P09027 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.56□□□□□ -0.88
Hoxd3P09027 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.56□□□□□ -0.88
Hoxd3P09027 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
Hoxd3P09027 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxd3P09027 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.56□□□□□ -0.88
Hoxd3P09027 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Hoxd3P09027 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.56□□□□□ -0.88
Hoxd3P09027 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Hoxd3P09027 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm24934-201ENSMUST00000103764 111 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm14277-201ENSMUST00000121195 360 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm6963-201ENSMUST00000147879 379 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm37809-201ENSMUST00000195050 931 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm37860-201ENSMUST00000195380 1034 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm44262-201ENSMUST00000204969 372 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm19187-201ENSMUST00000206781 892 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm45186-201ENSMUST00000206874 478 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.55□□□□□ -0.88
Hoxd3P09027 AC158981.3-201ENSMUST00000226844 1024 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm42829-201ENSMUST00000198417 2585 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Hoxd3P09027 Gm44241-201ENSMUST00000203230 1662 ntBASIC9.55□□□□□ -0.88
Hoxd3P09027 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hoxd3P09027 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hoxd3P09027 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hoxd3P09027 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms