Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.81□□□□□ -0.52
Hoxa4P06798 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Hoxa4P06798 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.81□□□□□ -0.52
Hoxa4P06798 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.81□□□□□ -0.52
Hoxa4P06798 Gm11663-201ENSMUST00000117888 290 ntBASIC11.81□□□□□ -0.52
Hoxa4P06798 Gm11450-201ENSMUST00000121144 333 ntBASIC11.81□□□□□ -0.52
Hoxa4P06798 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.81□□□□□ -0.52
Hoxa4P06798 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.81□□□□□ -0.52
Hoxa4P06798 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Hoxa4P06798 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.81□□□□□ -0.52
Hoxa4P06798 Gm37466-201ENSMUST00000195692 652 ntBASIC11.81□□□□□ -0.52
Hoxa4P06798 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hoxa4P06798 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hoxa4P06798 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hoxa4P06798 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Hoxa4P06798 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hoxa4P06798 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.81□□□□□ -0.52
Hoxa4P06798 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.81□□□□□ -0.52
Hoxa4P06798 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxa4P06798 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.8□□□□□ -0.52
Hoxa4P06798 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.8□□□□□ -0.52
Hoxa4P06798 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Gm15515-201ENSMUST00000117827 822 ntBASIC11.8□□□□□ -0.52
Hoxa4P06798 Gm11941-201ENSMUST00000119904 610 ntBASIC11.8□□□□□ -0.52
Hoxa4P06798 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Gm16570-201ENSMUST00000161951 436 ntBASIC11.8□□□□□ -0.52
Hoxa4P06798 Mir6927-201ENSMUST00000184494 71 ntBASIC11.8□□□□□ -0.52
Hoxa4P06798 Gm38117-201ENSMUST00000194653 939 ntBASIC11.8□□□□□ -0.52
Hoxa4P06798 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.8□□□□□ -0.52
Hoxa4P06798 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.8□□□□□ -0.52
Hoxa4P06798 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hoxa4P06798 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.8□□□□□ -0.52
Hoxa4P06798 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa4P06798 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxa4P06798 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxa4P06798 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxa4P06798 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxa4P06798 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Hoxa4P06798 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.79□□□□□ -0.52
Hoxa4P06798 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxa4P06798 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms