Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
CopeO89079 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.34□□□□□ -0.43
CopeO89079 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.34□□□□□ -0.43
CopeO89079 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Gm24548-201ENSMUST00000158650 108 ntBASIC12.34□□□□□ -0.43
CopeO89079 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.34□□□□□ -0.43
CopeO89079 Gm5706-201ENSMUST00000181525 993 ntBASIC12.34□□□□□ -0.43
CopeO89079 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.34□□□□□ -0.43
CopeO89079 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CopeO89079 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.34□□□□□ -0.43
CopeO89079 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.34□□□□□ -0.43
CopeO89079 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.34□□□□□ -0.43
CopeO89079 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CopeO89079 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.34□□□□□ -0.43
CopeO89079 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CopeO89079 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CopeO89079 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CopeO89079 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CopeO89079 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.33□□□□□ -0.44
CopeO89079 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CopeO89079 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.33□□□□□ -0.44
CopeO89079 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.33□□□□□ -0.44
CopeO89079 Gm11478-201ENSMUST00000117851 599 ntBASIC12.33□□□□□ -0.44
CopeO89079 Gm14247-201ENSMUST00000120950 237 ntBASIC12.33□□□□□ -0.44
CopeO89079 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.33□□□□□ -0.44
CopeO89079 Rprl1-201ENSMUST00000158050 327 ntBASIC12.33□□□□□ -0.44
CopeO89079 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.33□□□□□ -0.44
CopeO89079 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.33□□□□□ -0.44
CopeO89079 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.33□□□□□ -0.44
CopeO89079 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CopeO89079 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CopeO89079 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.33□□□□□ -0.44
CopeO89079 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CopeO89079 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.33□□□□□ -0.44
CopeO89079 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
CopeO89079 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CopeO89079 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.32□□□□□ -0.44
CopeO89079 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CopeO89079 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.32□□□□□ -0.44
CopeO89079 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.32□□□□□ -0.44
CopeO89079 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.32□□□□□ -0.44
CopeO89079 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CopeO89079 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.32□□□□□ -0.44
CopeO89079 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.32□□□□□ -0.44
CopeO89079 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.32□□□□□ -0.44
CopeO89079 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms