Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.79□□□□□ -0.2
Copb2O55029 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Copb2O55029 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.79□□□□□ -0.2
Copb2O55029 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Copb2O55029 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Copb2O55029 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.78□□□□□ -0.2
Copb2O55029 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.78□□□□□ -0.2
Copb2O55029 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Copb2O55029 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Gm13809-201ENSMUST00000117921 597 ntBASIC13.78□□□□□ -0.2
Copb2O55029 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.78□□□□□ -0.2
Copb2O55029 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.78□□□□□ -0.2
Copb2O55029 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.78□□□□□ -0.2
Copb2O55029 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Copb2O55029 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.78□□□□□ -0.2
Copb2O55029 Gm44126-201ENSMUST00000204831 514 ntBASIC13.78□□□□□ -0.2
Copb2O55029 Gm6905-201ENSMUST00000205729 511 ntBASIC13.78□□□□□ -0.2
Copb2O55029 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.78□□□□□ -0.2
Copb2O55029 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Gm45575-201ENSMUST00000210283 548 ntBASIC13.78□□□□□ -0.2
Copb2O55029 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Copb2O55029 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.78□□□□□ -0.2
Copb2O55029 Gm29787-201ENSMUST00000222129 849 ntBASIC13.78□□□□□ -0.2
Copb2O55029 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.78□□□□□ -0.2
Copb2O55029 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Copb2O55029 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.78□□□□□ -0.2
Copb2O55029 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.78□□□□□ -0.2
Copb2O55029 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Copb2O55029 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Copb2O55029 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Copb2O55029 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Copb2O55029 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.2
Copb2O55029 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Copb2O55029 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Copb2O55029 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Copb2O55029 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Copb2O55029 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
Copb2O55029 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.77□□□□□ -0.21
Copb2O55029 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Copb2O55029 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Copb2O55029 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.77□□□□□ -0.21
Copb2O55029 Gm15610-201ENSMUST00000120584 195 ntBASIC13.77□□□□□ -0.21
Copb2O55029 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Copb2O55029 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Copb2O55029 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Copb2O55029 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Copb2O55029 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.76□□□□□ -0.21
Copb2O55029 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Copb2O55029 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Copb2O55029 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.76□□□□□ -0.21
Copb2O55029 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Copb2O55029 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Copb2O55029 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Copb2O55029 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.76□□□□□ -0.21
Copb2O55029 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Copb2O55029 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Copb2O55029 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Copb2O55029 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Copb2O55029 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Copb2O55029 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Copb2O55029 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.76□□□□□ -0.21
Copb2O55029 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Copb2O55029 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Copb2O55029 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms