Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
OtpO09113 Gm30285-201ENSMUST00000214614 422 ntBASIC10.68□□□□□ -0.7
OtpO09113 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.68□□□□□ -0.7
OtpO09113 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.68□□□□□ -0.7
OtpO09113 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.68□□□□□ -0.7
OtpO09113 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.68□□□□□ -0.7
OtpO09113 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
OtpO09113 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.67□□□□□ -0.7
OtpO09113 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
OtpO09113 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.67□□□□□ -0.7
OtpO09113 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.67□□□□□ -0.7
OtpO09113 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
OtpO09113 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Gm23270-201ENSMUST00000104055 131 ntBASIC10.67□□□□□ -0.7
OtpO09113 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
OtpO09113 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
OtpO09113 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Gm7722-201ENSMUST00000120646 741 ntBASIC10.67□□□□□ -0.7
OtpO09113 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.67□□□□□ -0.7
OtpO09113 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.67□□□□□ -0.7
OtpO09113 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
OtpO09113 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.67□□□□□ -0.7
OtpO09113 Gm8712-201ENSMUST00000221090 701 ntBASIC10.67□□□□□ -0.7
OtpO09113 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
OtpO09113 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.67□□□□□ -0.7
OtpO09113 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
OtpO09113 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.67□□□□□ -0.7
OtpO09113 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
OtpO09113 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
OtpO09113 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
OtpO09113 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.66□□□□□ -0.7
OtpO09113 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.66□□□□□ -0.7
OtpO09113 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
OtpO09113 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.66□□□□□ -0.7
OtpO09113 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.66□□□□□ -0.7
OtpO09113 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.66□□□□□ -0.7
OtpO09113 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.66□□□□□ -0.7
OtpO09113 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.66□□□□□ -0.7
OtpO09113 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.66□□□□□ -0.7
OtpO09113 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.66□□□□□ -0.7
OtpO09113 Gm6013-201ENSMUST00000212264 699 ntBASIC10.66□□□□□ -0.7
OtpO09113 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
OtpO09113 Gm9996-201ENSMUST00000070359 913 ntBASIC10.66□□□□□ -0.7
OtpO09113 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.66□□□□□ -0.7
OtpO09113 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
OtpO09113 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
OtpO09113 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
OtpO09113 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms