Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trove2O08848 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.34□□□□□ -0.43
Trove2O08848 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.34□□□□□ -0.43
Trove2O08848 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trove2O08848 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Trove2O08848 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Trove2O08848 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.43
Trove2O08848 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trove2O08848 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.33□□□□□ -0.44
Trove2O08848 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.33□□□□□ -0.44
Trove2O08848 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trove2O08848 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trove2O08848 Rgr-203ENSMUST00000225070 4704 ntBASIC12.33□□□□□ -0.44
Trove2O08848 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.33□□□□□ -0.44
Trove2O08848 BC043934-202ENSMUST00000185694 2356 ntBASIC12.33□□□□□ -0.44
Trove2O08848 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.33□□□□□ -0.44
Trove2O08848 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trove2O08848 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.33□□□□□ -0.44
Trove2O08848 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trove2O08848 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.33□□□□□ -0.44
Trove2O08848 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.33□□□□□ -0.44
Trove2O08848 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.33□□□□□ -0.44
Trove2O08848 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.33□□□□□ -0.44
Trove2O08848 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.33□□□□□ -0.44
Trove2O08848 Gm27682-201ENSMUST00000183930 110 ntBASIC12.33□□□□□ -0.44
Trove2O08848 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.33□□□□□ -0.44
Trove2O08848 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.33□□□□□ -0.44
Trove2O08848 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.33□□□□□ -0.44
Trove2O08848 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.33□□□□□ -0.44
Trove2O08848 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.33□□□□□ -0.44
Trove2O08848 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trove2O08848 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trove2O08848 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.32□□□□□ -0.44
Trove2O08848 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.32□□□□□ -0.44
Trove2O08848 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.32□□□□□ -0.44
Trove2O08848 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trove2O08848 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trove2O08848 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.32□□□□□ -0.44
Trove2O08848 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.32□□□□□ -0.44
Trove2O08848 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.32□□□□□ -0.44
Trove2O08848 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.32□□□□□ -0.44
Trove2O08848 Gm6266-201ENSMUST00000203844 806 ntBASIC12.32□□□□□ -0.44
Trove2O08848 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.32□□□□□ -0.44
Trove2O08848 Gm32025-201ENSMUST00000217960 307 ntBASIC12.32□□□□□ -0.44
Trove2O08848 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.32□□□□□ -0.44
Trove2O08848 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trove2O08848 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms