Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Raet1bO08603 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Raet1bO08603 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.65□□□□□ -0.7
Raet1bO08603 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Raet1bO08603 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Raet1bO08603 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Raet1bO08603 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Raet1bO08603 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Raet1bO08603 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Raet1bO08603 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Raet1bO08603 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Raet1bO08603 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Raet1bO08603 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Raet1bO08603 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.65□□□□□ -0.71
Raet1bO08603 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Raet1bO08603 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Raet1bO08603 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
Raet1bO08603 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Raet1bO08603 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Raet1bO08603 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Raet1bO08603 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.64□□□□□ -0.71
Raet1bO08603 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.64□□□□□ -0.71
Raet1bO08603 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Raet1bO08603 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.64□□□□□ -0.71
Raet1bO08603 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Raet1bO08603 Gm14381-201ENSMUST00000122105 414 ntBASIC10.64□□□□□ -0.71
Raet1bO08603 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Raet1bO08603 Gm43822-201ENSMUST00000200285 476 ntBASIC10.64□□□□□ -0.71
Raet1bO08603 Gm3961-201ENSMUST00000204425 994 ntBASIC10.64□□□□□ -0.71
Raet1bO08603 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Raet1bO08603 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Raet1bO08603 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.64□□□□□ -0.71
Raet1bO08603 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Raet1bO08603 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Raet1bO08603 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.63□□□□□ -0.71
Raet1bO08603 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.63□□□□□ -0.71
Raet1bO08603 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.63□□□□□ -0.71
Raet1bO08603 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.63□□□□□ -0.71
Raet1bO08603 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.63□□□□□ -0.71
Raet1bO08603 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Gm24255-201ENSMUST00000104481 128 ntBASIC10.63□□□□□ -0.71
Raet1bO08603 Gm15198-201ENSMUST00000117283 177 ntBASIC10.63□□□□□ -0.71
Raet1bO08603 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Mir1938-201ENSMUST00000158746 100 ntBASIC10.63□□□□□ -0.71
Raet1bO08603 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.63□□□□□ -0.71
Raet1bO08603 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Raet1bO08603 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.63□□□□□ -0.71
Raet1bO08603 Gm45331-201ENSMUST00000209868 554 ntBASIC10.63□□□□□ -0.71
Raet1bO08603 Gm45598-202ENSMUST00000210719 986 ntBASIC10.63□□□□□ -0.71
Raet1bO08603 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.63□□□□□ -0.71
Raet1bO08603 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.63□□□□□ -0.71
Raet1bO08603 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.63□□□□□ -0.71
Raet1bO08603 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Raet1bO08603 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Raet1bO08603 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms