Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh1F7BJK1 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Gm12390-201ENSMUST00000117897 397 ntBASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Gm6222-202ENSMUST00000182143 629 ntBASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Gm29127-201ENSMUST00000188304 517 ntBASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Gm18711-201ENSMUST00000199341 750 ntBASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh1F7BJK1 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Gm5706-201ENSMUST00000181525 993 ntBASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Gm3890-201ENSMUST00000182416 207 ntBASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Gm18187-201ENSMUST00000196476 984 ntBASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Gm40466-201ENSMUST00000212174 422 ntBASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Gm5186-201ENSMUST00000218781 920 ntBASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.79□□□□□ -0.68
Pcdh1F7BJK1 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh1F7BJK1 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms