Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Gm11660-201ENSMUST00000120955 412 ntBASIC11.86□□□□□ -0.51
Srp54bE9PXC0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Gm10774-201ENSMUST00000188689 204 ntBASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm18893-201ENSMUST00000198416 943 ntBASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm5051-201ENSMUST00000204085 485 ntBASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srp54bE9PXC0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srp54bE9PXC0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms