Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Gm13342-201ENSMUST00000121055 207 ntBASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Gm2991-201ENSMUST00000173338 480 ntBASIC13.18□□□□□ -0.3
Trim30cD3YVI9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Morn2-202ENSMUST00000227729 656 ntBASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim30cD3YVI9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Gm16296-201ENSMUST00000159905 325 ntBASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.17□□□□□ -0.3
Trim30cD3YVI9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim30cD3YVI9 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Gm6621-201ENSMUST00000193251 772 ntBASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Gm44364-201ENSMUST00000198368 141 ntBASIC13.16□□□□□ -0.3
Trim30cD3YVI9 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim30cD3YVI9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 279.7 ms