Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tmf1B9EKI3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tmf1B9EKI3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 AC113082.1-201ENSMUST00000217324 327 ntBASIC16.2■□□□□ 0.18
Tmf1B9EKI3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Tmf1B9EKI3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Gm24891-201ENSMUST00000104391 136 ntBASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Gm13611-201ENSMUST00000118269 318 ntBASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Gm6506-201ENSMUST00000119775 1136 ntBASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Gm8199-201ENSMUST00000121323 823 ntBASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Gm14665-201ENSMUST00000122294 557 ntBASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Gm35960-201ENSMUST00000202712 767 ntBASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tmf1B9EKI3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC16.18■□□□□ 0.18
Tmf1B9EKI3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Mir680-2-201ENSMUST00000102163 110 ntBASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Gm23251-201ENSMUST00000103773 110 ntBASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Gm15207-201ENSMUST00000119259 442 ntBASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Gm5732-201ENSMUST00000182596 1007 ntBASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Gm45575-201ENSMUST00000210283 548 ntBASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC16.18■□□□□ 0.18
Tmf1B9EKI3 CT009713.8-201ENSMUST00000225448 560 ntBASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmf1B9EKI3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms