Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rrn3B2RS91 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rrn3B2RS91 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrn3B2RS91 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrn3B2RS91 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrn3B2RS91 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrn3B2RS91 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrn3B2RS91 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rrn3B2RS91 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrn3B2RS91 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rrn3B2RS91 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.11□□□□□ -0.47
Rrn3B2RS91 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.11□□□□□ -0.47
Rrn3B2RS91 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Gm27627-201ENSMUST00000183644 150 ntBASIC12.11□□□□□ -0.47
Rrn3B2RS91 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.11□□□□□ -0.47
Rrn3B2RS91 Gm18056-201ENSMUST00000207670 568 ntBASIC12.11□□□□□ -0.47
Rrn3B2RS91 Gm18061-201ENSMUST00000208350 562 ntBASIC12.11□□□□□ -0.47
Rrn3B2RS91 Gm18063-201ENSMUST00000208529 568 ntBASIC12.11□□□□□ -0.47
Rrn3B2RS91 Gm18052-201ENSMUST00000208750 559 ntBASIC12.11□□□□□ -0.47
Rrn3B2RS91 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.11□□□□□ -0.47
Rrn3B2RS91 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrn3B2RS91 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Rprl1-201ENSMUST00000158050 327 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm29615-201ENSMUST00000185371 697 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm28224-201ENSMUST00000186078 697 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm29001-201ENSMUST00000186177 697 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm28292-201ENSMUST00000186593 697 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm28101-201ENSMUST00000187608 697 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm29076-201ENSMUST00000187689 697 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm28302-201ENSMUST00000187931 697 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm28646-201ENSMUST00000188220 697 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm28205-201ENSMUST00000189177 697 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm29032-201ENSMUST00000189797 697 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm28695-201ENSMUST00000190300 697 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm37448-201ENSMUST00000192795 697 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 Gm17812-201ENSMUST00000204935 318 ntBASIC12.1□□□□□ -0.47
Rrn3B2RS91 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rrn3B2RS91 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrn3B2RS91 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrn3B2RS91 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrn3B2RS91 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.09□□□□□ -0.47
Rrn3B2RS91 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rrn3B2RS91 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms