Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Gm15566-201ENSMUST00000121130 590 ntBASIC12.51□□□□□ -0.41
Scn1aA2APX8 Gm6485-201ENSMUST00000160676 439 ntBASIC12.51□□□□□ -0.41
Scn1aA2APX8 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.51□□□□□ -0.41
Scn1aA2APX8 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.51□□□□□ -0.41
Scn1aA2APX8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.51□□□□□ -0.41
Scn1aA2APX8 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm11836-201ENSMUST00000121022 441 ntBASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm23045-201ENSMUST00000175041 96 ntBASIC12.5□□□□□ -0.41
Scn1aA2APX8 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm45113-201ENSMUST00000207518 165 ntBASIC12.5□□□□□ -0.41
Scn1aA2APX8 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.5□□□□□ -0.41
Scn1aA2APX8 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm37986-201ENSMUST00000193285 383 ntBASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.5□□□□□ -0.41
Scn1aA2APX8 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm17831-201ENSMUST00000205579 900 ntBASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.5□□□□□ -0.41
Scn1aA2APX8 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.5□□□□□ -0.41
Scn1aA2APX8 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1aA2APX8 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Gm15573-201ENSMUST00000119487 540 ntBASIC12.49□□□□□ -0.41
Scn1aA2APX8 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Gm8815-201ENSMUST00000173809 620 ntBASIC12.49□□□□□ -0.41
Scn1aA2APX8 Gm7467-201ENSMUST00000185173 652 ntBASIC12.49□□□□□ -0.41
Scn1aA2APX8 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1aA2APX8 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms