Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc194A0A140LIT1 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Rprl1-201ENSMUST00000158050 327 ntBASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc194A0A140LIT1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Gm43433-201ENSMUST00000196573 481 ntBASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc194A0A140LIT1 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms